| PKB-number:
|
PKB171
|
| Definition:
|
ORF1a/ORF1b (polymerase) ribosomal
frameshift site
|
| Organism:
|
human coronavirus 229E
|
| Abbreviation:
|
HCV_229E
|
| RNA type:
|
Viral Frameshift
|
| Keywords:
|
coronavirus;
ribosomal frameshifting;
polymerase
|
| EMBL number:
|
X69721
|
| Submitted by:
|
A.P.Gultyaev
(
A.P.Gultyaev@Biology.LeidenUniv.nl)
|
| Supported by:
|
Mutagenesis; Sequence comparison
|
| References:
|
[1] Herold J. & Siddell S.G. (1993). Nucleic Acids Res. 21:5838-5842.
|
Stem sizes:
Loop sizes:
|
12 5 7
3 0 156 2 1 |
| Position Paired:
|
12526-12537; 12546-12557
12541-12545; 12723-12727
12714-12720; 12729-12735 |
| Bracket view of structure:
|
12520 12530 12540 12550 12560
# 456789¦123456789¦123456789¦123456789¦123456789¦(149)
$ 12514 UUUAAACGAGUCCGGGGCUCUAGUGCCGCUCGACUAGAGCCCUGUAA=12560
% 12514 ::::::::::::((((((((((((:::[[[[[)))))))))))):::
12710 12720 12730
# (149) ¦123456789¦123456789¦1234567
$ 12710 CAGUUAUGGACCACGAGCAGUCCAUGUA=12737
% 12710 ::::(((((((::]]]]]:)))))))::
Contact:
© final design and maintenance: F.H.D.(Eke) van Batenburg; 1999-12-23 PKB00171.html
