| PKB-number: |
PKB171
|
| Definition: |
ORF1a/ORF1b (polymerase) ribosomal
frameshift site
|
| Organism: |
human coronavirus 229E
|
| Abbreviation: |
HCV_229E
|
| RNA type: |
Viral Frameshift
|
| Keywords: |
coronavirus;
ribosomal frameshifting;
polymerase
|
| EMBL number: |
X69721
|
| Submitted by: |
A.P.Gultyaev
(
A.P.Gultyaev@Biology.LeidenUniv.nl)
|
| Supported by: |
Mutagenesis; Sequence comparison
|
| References: |
[1] Herold J. & Siddell S.G. (1993). Nucleic Acids Res. 21:5838-5842.
|
Stem sizes:
Loop sizes: |
12 5 7
3 0 156 2 1 |
| Position Paired: |
12526-12537; 12546-12557
12541-12545; 12723-12727
12714-12720; 12729-12735 |
| Bracket view of structure:
|
12520 12530 12540 12550 12560
# 456789|123456789|123456789|123456789|123456789|(149)
$ 12514 UUUAAACGAGUCCGGGGCUCUAGUGCCGCUCGACUAGAGCCCUGUAA=12560
% 12514 ::::::::::::((((((((((((:::[[[[[)))))))))))):::
12710 12720 12730
# (149) |123456789|123456789|1234567
$ 12710 CAGUUAUGGACCACGAGCAGUCCAUGUA=12737
% 12710 ::::(((((((::]]]]]:)))))))::
Contact:
© final design and maintenance: F.H.D.(Eke) van Batenburg; 1999-12-23 PKB00171.html
