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BaMV

PKB-number: PKB172
Definition: The pseudoknot of the 3'UTR
Organism: bamboo mosaic virus
Abbreviation: BaMV
RNA type: Viral 3 UTR
Keywords: potexvirus; RNA 3'end
EMBL number: AF018156
Submitted by: A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl)
Supported by: Mutagenesis; Structure probing; 3D-modelling
References: [1] Cheng C.-P. & Tsai C.-H. (1999). J. Mol. Biol. 288:555-565.
Stem sizes:
Loop sizes:
6 6
9 0 3
Position Paired:
6343-6348; 6364-6369
6358-6363; 6373-6378
Bracket view of structure:
                  6350      6360      6370      6380
      #      23456789|123456789|123456789|123456789|
      $ 6342 CUUUUGGUUUCUACAGUUUUUUCCAAAAAAAAAAAAAAA=6380
      % 6342 :((((((:::::::::[[[[[[)))))):::]]]]]]::

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© final design and maintenance: F.H.D.(Eke) van Batenburg; 1999-12-23 PKB00172.html