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DCV_IRES-PKI

PKB-number: PKB216
Definition: Pseudoknot PKI of the internal ribosomal entry site (IRES) region
Organism: Drosophila C virus
Abbreviation: DCV_IRES-PKI
RNA type: Viral others
Keywords: Picornaviridae; Internal ribosomal entry site (IRES); Translation; Cricket paralysis-like virus
EMBL number: AF014388
Submitted by: A.P.Gultyaev ( gultyaev@rulsfb.LeidenUniv.nl)
Supported by: Sequence comparison
References: [1] Kanamori Y. & Nakashima N. (2001). RNA 7:266-274.
Stem sizes:
Loop sizes:
9 5
1 0 9
Position Paired:
6224-6227; 6249-6252
6231-6235; 6242-6246
6237-6241; 6262-6266
Bracket view of structure:
                 6230      6240      6250      6260
      #      3456789|123456789|123456789|123456789|1234567
      $ 6223 CUUCUUAUAUGAUUAGGUUGUCAUUUAGAAUAAGAAAAUAACCUG=6267
      % 6223 :((((:::(((((:[[[[[)))))::)))):::::::::]]]]]:

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© final design and maintenance: F.H.D.(Eke) van Batenburg; 2001-5-17 PKB00216.html