| PKB-number: |
PKB217
|
| Definition: |
ORF1a/ORF1b (polymerase) ribosomal frameshift site
|
| Organism: |
lactate dehydrogenase-elevating virus, strain C
|
| Abbreviation: |
LDV-C
|
| RNA type: |
Viral Frameshift
|
| Keywords: |
arterivirus;
ribosomal frameshifting;
polymerase
|
| EMBL number: |
L13298
|
| Submitted by: |
A.P. Gultyaev
(
gultyaev@rulsfb.LeidenUniv.nl)
|
| Supported by: |
Sequence comparison
|
| References: |
[1] Godeny E.K. et al. (1993). Virology 194:585-596.
|
Stem sizes:
Loop sizes: |
11 6
3 3 19 |
| Position Paired: |
6843-6853; 6866-6876
6857-6862; 6896-6901 |
| Bracket view of structure:
|
6830 6840 6850 6860 6870 6880
# |123456789|123456789|123456789|123456789|123456789|123456789
$ 6830 UUUAAACUGCUAGCCACCUCUGGUCUCGACCGCUGUACUAGAGGUGGGCUGACGGUGUYU=6889
% 6830 :::::::::::::(((((((((((:::[[[[[[:::))))))))))):::::::::::::
6890 6900
# |123456789|12
$ 6890 GGCGAUGCGGUCA=6902
% 6890 ::::::]]]]]]:
Contact:
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