PKB-number: |
PKB224
|
Definition: |
Pseudoknot PKI of the internal ribosomal entry site (IRES) region
|
Organism: |
Triatoma virus
|
Abbreviation: |
TrV_IRES-PKI
|
RNA type: |
Viral others
|
Keywords: |
Picornaviridae;
Internal ribosomal entry site (IRES);
Translation;
Cricket paralysis-like virus
|
EMBL number: |
AF178440
|
Submitted by: |
A.P. Gultyaev
(
gultyaev@rulsfb.LeidenUniv.nl)
|
Supported by: |
Sequence comparison
|
References: |
[1] Kanamori Y. & Nakashima N. (2001). RNA 7:266-274.
|
Stem sizes: Loop sizes: |
8 5
1 0 9 |
Position Paired: |
6071-6074; 6094-6097
6078-6081; 6088-6091
6083-6087; 6107-6111 |
Bracket view of structure:
|
6070 6080 6090 6100 6110
# |123456789|123456789|123456789|123456789|12
$ 6070 UUUCCUAUACCUCGAGUCGGGUUUGGAAUCUAAGGUUGACUCG=6112
% 6070 :((((:::((((:[[[[[))))::)))):::::::::]]]]]:
Contact:
© final design and maintenance: F.H.D.(Eke) van Batenburg; 2001-5-17 PKB00224.html