| PKB-number:
|
PKB248
|
| Definition:
|
tRNA-like structure pseudoknot PKb of Nemesia ring necrosis virus
|
| Organism:
|
Nemesia ring necrosis virus
|
| Abbreviation:
|
NeRNV_PKb
|
| RNA type:
|
Viral tRNA-like
|
| Keywords:
|
tymovirus; histidylation
|
| EMBL number:
|
AY751778
|
| Submitted by:
|
A.P. Gultyaev
(
a.p.gultyaev@biology.leidenuniv.nl)
|
| Supported by:
| Sequence comparison; histidylation
|
| References:
|
[1] Koenig R. et al. (2005). J. Gen. Virol. 86:1827-1833.
|
| Comment:
|
|
Stem sizes:
Loop sizes:
|
6 3
5 32 8 |
| Position Paired:
|
6186-6191; 6232-6237
6197-6199; 6246-6248
6200-6203; 6228-6231
6208-6214; 6220-6226 |
| Bracket view of structure:
|
6190 6200 6210 6220 6230 6240 6250
# 56789|123456789|123456789|123456789|123456789|123456789|123456789|
$ 6185 UGUUCCUUGGAUUGCUACGUUCACCAGAUUUGUGUAAUCUGGCCGUUAGGAACUUAAAAUUGCGCG=6250
% 6185 :((((((:::::[[[((((::::(((((((:::::))))))):))))))))))::::::::]]]::
Contact:
© final design and maintenance: F.H.D.(Eke) van Batenburg; 2007-5-17 PKB00248.html
