| PKB-number:
|
PKB253
|
| Definition:
|
ORF1a/1b ribosomal frameshift site of White Bream Virus
|
| Organism:
|
White Bream Virus
|
| Abbreviation:
|
WBV
|
| RNA type:
|
Viral Frameshift
|
| Keywords:
|
Nidovirales; ribosomal frameshifting
|
| EMBL number:
|
NC_008516
|
| Submitted by:
|
A.P. Gultyaev
(
a.p.gultyaev@biology.leidenuniv.nl)
|
| Supported by:
| Sequence comparison; |
| References:
|
[1] Schutze H. et al. (2006). J. Virol. 80:11598-11609.
|
| Comment:
|
|
Stem sizes:
Loop sizes:
|
14 5
3 0 29 |
| Position Paired:
|
14560-14573; 14582-14595
14577-14581; 14625-14629 |
| Bracket view of structure:
|
14550 14560 14570 14580 14590 14600
# 9|123456789|123456789|123456789|123456789|123456789|
$ 14549 UUUAAACUGGUGGGGCAGUGUCUAGGAUUGACGUUAGACACUGCUUUUUGCC=14600
% 14549 :::::::::::((((((((((((((:::[[[[[)))))))))))))):::::
14610 14620 14630
# 123456789|123456789|123456789|
$ 14601 CGUUUCAAACAGGUGAAUACAAACCGUCAU=14630
% 14601 ::::::::::::::::::::::::]]]]]:
Contact:
© final design and maintenance: F.H.D.(Eke) van Batenburg; 2007-5-17 PKB00253.html
