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TEV_PK1

PKB-number: PKB277
Definition: The 5'-leader pseudoknot PK1 of TEV
Organism: tobacco etch virus
Abbreviation: TEV_PK1
RNA type: Viral 5 UTR
Keywords: Potyviridae; cap-independent translation
EMBL number: NC_001555
Submitted by: A.P. Gultyaev ( a.p.gultyaev@biology.leidenuniv.nl)
Supported by: Mutagenesis; Structure probing;
References: [1] Zeenko V. & Gallie D.R. (2005). J. Biol. Chem. 280:26813-26824.
Comment:
Stem sizes:
Loop sizes:
6 5
3 2 7
Position Paired:
38-41; 57-60
42-43; 54-55
47-51; 68-72
Bracket view of structure:
       40        50        60        70
#    789|123456789|123456789|123456789|123
$ 37 CGAAUCUCAAGCAAUCAAGCAUUCUACUUCUAUUGCA=73
% 37 :((((((:::[[[[[::)):)))):::::::]]]]]:

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© final design and maintenance: F.H.D.(Eke) van Batenburg; 2007-5-17 PKB00277.html