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drz_Fpra_1

PKB-number: PKB339
Definition: HDV-like ribozyme
Organism: Faecalibacterium prausnitzii
Abbreviation: drz_Fpra_1
RNA type: Ribozymes
Keywords: self-cleavage; hepatitis delta virus ribozyme; HDV-like ribozyme
EMBL number: BK006894
Submitted by: A.P. Gultyaev (a.p.gultyaev@biology.leidenuniv.nl)
Supported by: Sequence comparison,ribozyme activity
References: [1] Webb CH, Riccitelli NJ, Ruminski DJ & Luptak A (2009). Science 326:953.
Stem sizes:
Loop sizes:
7 8 3 2
1 0 1 4 0
Position Paired:
1 -7 ; 30-36
9 -16; 62-69
17-19; 27-29
21-22; 37-38
43-47; 52-56
Bracket view of structure:
            10        20        30        40        50        60
#   123456789|123456789|123456789|123456789|123456789|123456789|123456789
$ 1 GCUGCUCAUAUAUGCUACCUCUCCGUGGUGAGCAGUAGGCAACGGAUCUCUAUCCGGCUAAAGCAUGUG=69
% 1 (((((((:[[[[[[[[(((:[[::::))))))))))]]::::(((((::::))))):::::]]]]]]]]


Contact:
© final design and maintenance: F.H.D.(Eke) van Batenburg; 2010-1-18 PKB00339.HTML