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Intro | |||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | ||||
| BLV |  |
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| PKB-number: | PKB1 |
| Definition: | Gag/pro ribosomal frameshift site of Bovine Leukemia Virus |
| Organism: | Bovine Leukemia Virus |
| Abbreviation: | BLV |
| RNA type: | Viral ribosomal frameshifting |
| Keywords: | retroviridae; ribosomal frameshift; gag-pro |
| EMBL number: | AF033818 |
| Submitted by: | J. Ng ( JackTown@Hotmail.com) |
| Supported by: | Sequence comparison |
| References: |
[1] ten Dam,E., Pleij,C.W.A. & Bosch,L.(1990). Virus Genes 4, 121-136.
[2] Sagata,N. et al.(1985). Proc.Natl.Acad.Sci.USA 82, 677-681. [3] Rice,N.R. et al.(1985). Virology 142, 357-377. |
| Stem sizes: Loop sizes: |
6 3 5 0 4 |
| Position Paired: | 1604-1609; 1618-1623 1615-1617; 1628-1630 |
| Bracket view of structure: |
1590 1600 1610 1620 1630
# |123456789|123456789|123456789|123456789|123456
$ 1590 AAAAAACUAAUAGAGGGGGGACUUAGCGCCCCCCAAACCGUAACCCC=1636
% 1590 ::::::::::::::[[[[[[:::::(((]]]]]]::::)))::::::