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CGMMV_UPD-PK1

PKB-number: PKB89
Definition: Pseudoknot PK1 of the upstream pseudoknot domain (UPD) of the 3'-UTR of cucumber green mottle mosaic virus
Organism: cucumber green mottle mosaic virus
Abbreviation: CGMMV_UPD-PK1
RNA type: Viral 3 UTR
Keywords: tobamovirus; translational regulation
EMBL number: D12505
Submitted by: A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl)
Supported by: Sequence comparison
References: [1] van Belkum A. et al. (1985). Nucleic Acids Res. 13:7673-7686.
[2] Leathers V. et al. (1993). Mol. Cell. Biol. 13:5331-5347.
Stem sizes:
Loop sizes:
8 4
2 0 5
Position Paired:
6235-6242; 6249-6256
6245-6248; 6262-6265
Bracket view of structure:
               6240      6250      6260
     #      456789|123456789|123456789|123456
     $ 6234 ACCUCGAAAGCUUAGUUUCGAGGGUCUUCUGAU=6266
     % 6234 :((((((((::[[[[)))))))):::::]]]]:

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© final design and maintenance: F.H.D.(Eke) van Batenburg; 1999-6-16 PKB00089.html