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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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EAV |  |
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| PKB-number: | PKB127 |
| Definition: | ORF1a/ORF1b (polymerase) ribosomal frameshift site of equine arteritis virus |
| Organism: | equine arteritis virus |
| Abbreviation: | EAV |
| RNA type: | Viral Frameshift |
| Keywords: | arterivirus; robosomal frameshifting; polymerase |
| EMBL number: | Y07862 |
| Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
| Supported by: | Mutagenesis; Sequence comparison |
| References: |
[1] den Boon J.A. et al. (1991). J. Virol. 65:2910-2920.
[2] den Boon J.A. (1996). Ph.D. Thesis, Leiden University. |
| Stem sizes: Loop sizes: |
11 6 2 1 69 |
| Position Paired: | 5412-5422; 5432-5442 5425-5430; 5512-5517 |
| Bracket view of structure: |
5400 5410 5420 5430 5440 0 5520
# 9|123456789|123456789|123456789|123456789|123=5443 |123456789|
$ 5399 GUUAAACUGAGAGCGCCCCACAUCUUUCCCGGCGAUGUGGGGCGU......GCCCGGGACUU=5520
% 5399 :::::::::::::(((((((((((::[[[[[[:))))))))))):......::]]]]]]:::