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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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PMMV-S_PKbulge |  |
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| PKB-number: | PKB143 |
| Definition: | tRNA-like structure bulge pseudoknot of pepper mild mottle virus, Spanish isolate |
| Organism: | pepper mild mottle virus |
| Abbreviation: | PMMV-S_PKbulge |
| RNA type: | Viral tRNA-like |
| Keywords: | tobamovirus; RNA 3'end |
| EMBL number: | M81413 |
| Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
| Supported by: | Sequence comparison |
| References: |
[1] Avila-Rincon M.J. et al. (1989). J. Gen. Virol. 70:3025-3031.
[2] Mans R.M.W. et al. (1991). Eur. J. Biochem. 201:303-324. |
| Stem sizes: Loop sizes: |
7 5 4 33 8 |
| Position Paired: | 6251-6257; 6300-6306 6267-6269; 6297-6299 6274-6282; 6288-6296 6262-6266; 6315-6319 |
| Bracket view of structure: |
6250 6260 6270 6280 6290 6300 6310 6320
# |123456789|123456789|123456789|123456789|123456789|123456789|123456789|
$ 6250 UUGUCGUUGGGAUGGAACGCAAUUAAAUACAUGUGUGACGUGUAUUUGCGAACGACGUAAUUAUUUUUCAG=6320
% 6250 :(((((((::::[[[[[(((::::(((((((((:::::)))))))))))))))))))::::::::]]]]]: