 |
Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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LDV-C |  |
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| PKB-number: | PKB217 |
| Definition: | ORF1a/ORF1b (polymerase) ribosomal frameshift site |
| Organism: | lactate dehydrogenase-elevating virus, strain C |
| Abbreviation: | LDV-C |
| RNA type: | Viral Frameshift |
| Keywords: | arterivirus; ribosomal frameshifting; polymerase |
| EMBL number: | L13298 |
| Submitted by: | A.P. Gultyaev ( gultyaev@rulsfb.LeidenUniv.nl) |
| Supported by: | Sequence comparison |
| References: | [1] Godeny E.K. et al. (1993). Virology 194:585-596. |
| Stem sizes: Loop sizes: |
11 6 3 3 19 |
| Position Paired: | 6843-6853; 6866-6876 6857-6862; 6896-6901 |
| Bracket view of structure: |
6830 6840 6850 6860 6870 6880
# |123456789|123456789|123456789|123456789|123456789|123456789
$ 6830 UUUAAACUGCUAGCCACCUCUGGUCUCGACCGCUGUACUAGAGGUGGGCUGACGGUGUYU=6889
% 6830 :::::::::::::(((((((((((:::[[[[[[:::))))))))))):::::::::::::
6890 6900
# |123456789|12
$ 6890 GGCGAUGCGGUCA=6902
% 6890 ::::::]]]]]]: