| PKB-number: |
PKB246
|
| Definition: |
HCV IRES domain IV pseudoknot of unknown function
|
| Organism: |
Hepatitis C Virus
|
| Abbreviation: |
HCV
|
| RNA type: |
Viral 5 UTR
|
| Keywords: |
Flaviviridae; HCV; IRES-dependent translation
|
| EMBL number: |
AJ238799
|
| Submitted by: |
William B. Lott
|
| Supported by: |
Mutagenesis; Sequence comparison; Structure probing; |
| References: |
|
| Comment: |
This is pseudoknot of unknown function that harbors the HCV start codon and utilizes sequences from both the HCV 5'UTR and the HCV ORF.
|
Stem sizes:
Loop sizes: |
6 4
5 0 6 |
| Position Paired: |
331-332; 353-354
334-337; 347-350
343-346; 361-364 |
