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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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antiHIV1-RT_1.1 |
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| PKB-number: | PKB300 |
| Definition: | RNA aptamer against HIV-1 reverse transcriptase |
| Organism: | |
| Abbreviation: | antiHIV1-RT_1.1 |
| RNA type: | Aptamers |
| Keywords: | SELEX; reverse transcriptase; HIV |
| EMBL number: | |
| Submitted by: | A.P. Gultyaev (a.p.gultyaev@biology.leidenuniv.nl) |
| Supported by: | Crystal structure,Sequence comparison |
| References: |
[1] Tuerk C. et al. (1992). Proc. Natl. Acad. Sci. USA 89:6988-6992.
[2] Jaeger J. et al. (1998). EMBO J. 17:4535-4542. |
| Stem sizes: Loop sizes: |
5 6 2 0 3 |
| Position Paired: | 8 -12; 21-25 |
| Bracket view of structure: |
10 20 30
# 123456789|123456789|123456789|1234567
$ 1 UCAAGAAUUCCGUUUUCAGUCGGGAAAAACUGAACAA=37
% 1 :::::::(((((::[[[[[[))))):::]]]]]]:::