PKB-number: |
PKB309
|
Definition: |
Regulatory pseudoknot of the interferon-gamma gene 5'-UTR
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Organism: |
Bos taurus (cow)
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Abbreviation: |
IFNG_PK_B_taurus
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RNA type: |
mRNA
|
Keywords: |
translation; PKR
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EMBL number: |
Z54144
|
Submitted by: |
A.P. Gultyaev
(a.p.gultyaev@biology.leidenuniv.nl)
|
Supported by: |
Mutagenesis,Sequence comparison,Structure probing
|
References: |
[1] Cohen-Chalamish S. et al. (2009). Nature Chem. Biol. 5:896-903
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Comment: |
This pseudoknot can adopt alternative conformations, conserved in mammalian IFN-gamma mRNA's [1].
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Stem sizes: Loop sizes: |
6 24 0 4 5
|
Position Paired: |
2628-2633; 2683-2688 2634-2634; 2736-2736 2637-2637; 2733-2733 2639-2641; 2728-2730 2645-2646; 2721-2722 2651-2652; 2716-2717 2657-2664; 2705-2712 2666-2666; 2703-2703 2668-2669; 2701-2702 2675-2678; 2694-2697
|