| PKB-number: |
PKB311
|
| Definition: |
Regulatory pseudoknot of the interferon-gamma gene 5'-UTR
|
| Organism: |
Callitrix jacchus (marmoset)
|
| Abbreviation: |
IFNG_PK_C_jacchus
|
| RNA type: |
mRNA
|
| Keywords: |
translation; PKR
|
| EMBL number: |
X64659
|
| Submitted by: |
A.P.Gultyaev
(a.p.gultyaev@biology.leidenuniv.nl)
|
| Supported by: |
Mutagenesis,Sequence comparison,Structure probing
|
| References: |
[1] Cohen-Chalamish S. et al. (2009). Nature Chem. Biol. 5:896-903.
|
| Comment: |
This pseudoknot can adopt alternative conformations, conserved in mammalian IFN-gamma mRNA's [1].
|
Stem sizes:
Loop sizes: |
6 36
0 4 8
|
| Position Paired: |
2651-2656; 2706-2711
2657-2658; 2761-2762
2660-2661; 2758-2759
2662-2664; 2754-2756
2665-2671; 2745-2751
2674-2678; 2739-2743
2680-2689; 2729-2738
2693-2695; 2725-2727
2698-2701; 2720-2723
|
