| PKB-number: |
PKB376
|
| Definition: |
Pseudoknot in the NP vRNA of influenza A virus
|
| Organism: |
influenza A virus, strain A/PR/8/34
|
| Abbreviation: |
IAV_PK_NP
|
| RNA type: |
Viral others
|
| Keywords: |
Orthomyxoviridae; influenza virus
|
| EMBL number: |
EF467822
|
| Submitted by: |
A.P. Gultyaev
(a.p.goultiaev@liacs.leidenuniv.nl)
|
| Supported by: |
Mutagenesis,Sequence comparison
|
| References: |
[1] Gultyaev A.P. et al. (2014). RNA Biol. 11:942-952.
|
| Comment: |
The numbering is given for negative-sense vRNA, complementary to the sequence provided by the nucleotide sequence database. Similar pseudoknots are formed in other strains of influenza A virus [1].
|
Stem sizes:
Loop sizes: |
6 7
1 0 12
|
| Position Paired: |
91 -94 ; 108-111
95 -96 ; 105-106
98 -104; 124-130
|
