| PKB-number: |
PKB66
|
| Definition: |
The pseudoknot of SELEX-isolated inhibitor
(ligand 70.28) of HIV-1 reverse transcriptase
|
| Organism: |
|
| Abbreviation: |
TPK-70.28
|
| RNA type: |
Aptamers
|
| Keywords: |
SELEX;
reverse transcriptase;
HIV
|
| EMBL number: |
|
| Submitted by: |
A.P.Gultyaev
(
A.P.Gultyaev@Biology.LeidenUniv.nl)
|
| Supported by: |
Sequence comparison
|
| References: |
[1] Burke D.H. et al. (1996). J. Mol. Biol. 264:650-666.
|
| Comment: |
The pseudoknot belongs to the so-called
"Tuerk-type" pseudoknot (TPK). The pseudoknot
is supported by covariations in the family of
SELEX ligands that inhibit reverse transcriptase activity.
|
Stem sizes:
Loop sizes: |
3 5
2 4 7 |
| Position Paired: |
27-29; 41-43
32-36; 51-55 |
