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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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TMV-L_UPD-PK3 |  |
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| PKB-number: | PKB84 |
| Definition: | Pseudoknot PK3 of the upstream pseudoknot domain (UPD) of the 3'-UTR of the tomato strain of tobacco mosaic virus |
| Organism: | tobacco mosaic virus |
| Abbreviation: | TMV-L_UPD-PK3 |
| RNA type: | Viral 3 UTR |
| Keywords: | tobamovirus; translational regulation |
| EMBL number: | X02144 |
| Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
| Supported by: | Sequence comparison |
| References: |
[1] van Belkum A. et al. (1985). Nucleic Acids Res. 13:7673-7686.
[2] Leathers V. et al. (1993). Mol. Cell. Biol. 13:5331-5347. |
| Stem sizes: Loop sizes: |
4 5 5 0 6 |
| Position Paired: | 6248-6251; 6262-6265 6257-6260; 6274-6277 6261-6261; 6272-6272 |
| Bracket view of structure: |
6250 6260 6270
# 789|123456789|123456789|12345678
$ 6247 CAGUGUUUUUCCCUCCACUUAAAUCGAAGGGU=6278
% 6247 :((((:::::[[[[[))))::::::]:]]]]: