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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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PSLVbeta |  |
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| PKB-number: | PKB164 |
| Definition: | tRNA-like structure 3'end pseudoknot of RNA beta |
| Organism: | poa semilatent virus |
| Abbreviation: | PSLVbeta |
| RNA type: | Viral tRNA-like |
| Keywords: | hordeivirus; RNA 3'end |
| EMBL number: | M81486 |
| Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
| Supported by: | Sequence comparison |
| References: | [1] Solovyev A.G. et al. (1996). Virology 219:9-18. |
| Stem sizes: Loop sizes: |
14 5 2 1 26 |
| Position Paired: | 3497-3504; 3549-3556 3507-3512; 3521-3526 3515-3519; 3583-3587 3531-3536; 3543-3548 3558-3563; 3569-3574 |
| Bracket view of structure: |
3500 3510 3520 3530 3540 3550
# 6789|123456789|123456789|123456789|123456789|123456789|12345
$ 3496 AUUGGUAUGUAAGCUACUUCUUCCAGUAGCUGCGUCAUAACAUCAAGGUUAUGCAUACUG=3555
% 3496 :((((((((::((((((::[[[[[:))))))::::((((((::::::)))))))))))))
3560 3570 3580 3590
# 6789|123456789|123456789|123456789|1
$ 3556 AGCCGAAGCUCAGCUUCGGUCCUCCAAGGAAGACCA=3591
% 3556 ):((((((:::::))))))::::::::]]]]]::::