| PKB-number: |
PKB164
|
| Definition: |
tRNA-like structure 3'end pseudoknot of
RNA beta
|
| Organism: |
poa semilatent virus
|
| Abbreviation: |
PSLVbeta
|
| RNA type: |
Viral tRNA-like
|
| Keywords: |
hordeivirus;
RNA 3'end
|
| EMBL number: |
M81486
|
| Submitted by: |
A.P.Gultyaev
(
A.P.Gultyaev@Biology.LeidenUniv.nl)
|
| Supported by: |
Sequence comparison
|
| References: |
[1] Solovyev A.G. et al. (1996). Virology 219:9-18.
|
Stem sizes:
Loop sizes: |
14 5
2 1 26 |
| Position Paired: |
3497-3504; 3549-3556
3507-3512; 3521-3526
3515-3519; 3583-3587
3531-3536; 3543-3548
3558-3563; 3569-3574
|
| Bracket view of structure:
|
3500 3510 3520 3530 3540 3550
# 6789|123456789|123456789|123456789|123456789|123456789|12345
$ 3496 AUUGGUAUGUAAGCUACUUCUUCCAGUAGCUGCGUCAUAACAUCAAGGUUAUGCAUACUG=3555
% 3496 :((((((((::((((((::[[[[[:))))))::::((((((::::::)))))))))))))
3560 3570 3580 3590
# 6789|123456789|123456789|123456789|1
$ 3556 AGCCGAAGCUCAGCUUCGGUCCUCCAAGGAAGACCA=3591
% 3556 ):((((((:::::))))))::::::::]]]]]::::
Contact:
© final design and maintenance: F.H.D.(Eke) van Batenburg; 1999-12-22 PKB00164.html
