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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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BaMV |  |
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| PKB-number: | PKB172 |
| Definition: | The pseudoknot of the 3'UTR |
| Organism: | bamboo mosaic virus |
| Abbreviation: | BaMV |
| RNA type: | Viral 3 UTR |
| Keywords: | potexvirus; RNA 3'end |
| EMBL number: | AF018156 |
| Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
| Supported by: | Mutagenesis; Structure probing; 3D-modelling |
| References: | [1] Cheng C.-P. & Tsai C.-H. (1999). J. Mol. Biol. 288:555-565. |
| Stem sizes: Loop sizes: |
6 6 9 0 3 |
| Position Paired: | 6343-6348; 6364-6369 6358-6363; 6373-6378 |
| Bracket view of structure: |
6350 6360 6370 6380
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$ 6342 CUUUUGGUUUCUACAGUUUUUUCCAAAAAAAAAAAAAAA=6380
% 6342 :((((((:::::::::[[[[[[)))))):::]]]]]]::