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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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biotin-PK-AN69.1 |  |
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| PKB-number: | PKB176 |
| Definition: | Biotin-binding pseudoknot |
| Organism: | |
| Abbreviation: | biotin-PK-AN69.1 |
| RNA type: | Aptamers |
| Keywords: | biotin; SELEX |
| EMBL number: | |
| Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
| Supported by: | Crystal structure; Mutagenesis; Sequence comparison |
| References: |
[1] Wilson C. et al. (1998). Biochemistry 37:14410-14419.
[2] Nix J.C. et al. (1999). Acta Cryst. D55:323-325. [3] Nix J.C. et al. (2000). J. Mol. Biol. 296:1235-1244. |
| Stem sizes: Loop sizes: |
5 6 2 0 6 |
| Position Paired: | 3-7; 16-20 10-15; 27-32 |
| Bracket view of structure: |
10 20 30
# 123456789|123456789|123456789|123
$ 1 GGACCGUCAGAGGACACGGUUAAAAAGUCCUCU=33
% 1 ::(((((::[[[[[[)))))::::::]]]]]]: