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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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biotin-PK |  |
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| PKB-number: | PKB175 |
| Definition: | Biotin-binding RNA pseudoknot |
| Organism: | |
| Abbreviation: | biotin-PK |
| RNA type: | Aptamers |
| Keywords: | biotin; SELEX |
| EMBL number: | |
| Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
| Supported by: | Mutagenesis; Sequence comparison; Structure probing; 3D-modelling |
| References: |
[1] Wilson C. & Szostak J.W. (1995). Nature 374:777-782.
[2] Wilson C. et al. (1998). Biochemistry 37:14410-14419. |
| Stem sizes: Loop sizes: |
5 7 1 0 30 |
| Position Paired: | 19-23; 32-36 25-31; 67-73 |
| Bracket view of structure: |
20 30 40 50 60 70
# 89|123456789|123456789|123456789|123456789|123456789|1234
$ 18 CACCGACCAUAGGCUCGGGUUGCCAGAGGUUCCACACUUUCAUCGAAAAGCCUAUGC=74
% 18 :(((((:[[[[[[[)))))::::::::::::::::::::::::::::::]]]]]]]: