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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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ribox02 |  |
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| PKB-number: | PKB252 |
| Definition: | Alcohol dehydrogenase ribozyme |
| Organism: | |
| Abbreviation: | ribox02 |
| RNA type: | Ribozymes |
| Keywords: | in vitro evolution |
| EMBL number: | |
| Submitted by: | A.P. Gultyaev ( a.p.gultyaev@biology.leidenuniv.nl) |
| Supported by: | Mutagenesis; Sequence comparison; |
| References: | Tsukiji S., Pattnaik S.B. & Suga H. (2003). Nature Struct. Biol. 10:713-717. |
| Comment: | |
| Stem sizes: Loop sizes: |
6 9 31 5 28 |
| Position Paired: | 1-6; 52-57 8-12; 32-36 16-21; 26-31 63-69; 76-82 38-46; 86-94 96-101; 105-110 |
| Bracket view of structure: |
10 20 30 40 50 60
# 123456789|123456789|123456789|123456789|123456789|123456789|
$ 1 GGGAUCGUCAGUGCAUUGAGAUGUUUCUCAGACUGAUUAUCGUGAGACAGUGAUCUCGUG=60
% 1 ((((((:(((((:::((((((::::))))))))))):[[[[[[[[[:::::)))))):::
70 80 90 100 110
# 123456789|123456789|123456789|123456789|123456789|
$ 61 GUCAGUCCUAGUUUGGGGGCUGGUCCUCACGGUGGUAUCCCCAAGGGGUA=110
% 61 ::(((((((::::::))))))):::]]]]]]]]]:((((((:::))))))