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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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PCV1 |  |
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| PKB-number: | PKB33 |
| Definition: | tRNA-like structure 3'end pseudoknot of RNA1 of peanut clump virus |
| Organism: | peanut clump virus |
| Abbreviation: | PCV1 |
| RNA type: | Viral tRNA-like |
| Keywords: | furovirus; 3'end; aminoacylation |
| EMBL number: | X78602 |
| Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
| Supported by: | Sequence comparison; aminoacylation assays |
| References: |
[1] Herzog E et al., J.Gen.Virol. 1994, 75:3147-3155.
[2] Goodwin JB, Dreher TW. Virology 1998, 246:170-178. |
| Stem sizes: Loop sizes: |
3 5 4 0 3 |
| Position Paired: | 5871-5873; 5883-5885 5878-5882; 5889-5893 |
| Bracket view of structure: |
5860 5870 5880 5890
# 89|123456789|123456789|123456789|1234567
$ 5858 GGUGCAAAUCCCCCGCUGAAACGGAGCGAUAUCCGUCCCA=5897
% 5858 :::::::::::::(((::::[[[[[))):::]]]]]::::