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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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Lp_PK4 |  |
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| PKB-number: | PKB70 |
| Definition: | Pseudoknot PK4 of Legionella pneumophila tmRNA |
| Organism: | Legionella pneumophila |
| Abbreviation: | Lp_PK4 |
| RNA type: | tmRNA |
| Keywords: | trans-translation; peptide tagging; tmRNA |
| EMBL number: | U68079 |
| Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
| Supported by: | Sequence comparison |
| References: |
[1] Williams K.P. & Bartel D.P. (1996). RNA 2:1306-1310.
[2] Williams K.P. (2000). Nucleic Acids Res. 28:168. (The tmRNA Website: http://www.indiana.edu/~tmrna/). [3] Zwieb C. & Wower J. (2000). Nucleic Acids Res. 28:169-170. (tmRNA database: http://psyche.uthct.edu/dbs/tmRDB/tmRDB.html). |
| Stem sizes: Loop sizes: |
11 6 1 0 11 |
| Position Paired: | 289-294; 319-324 297-298; 315-316 300-302; 311-313 304-306; 341-343 308-310; 336-338 |
| Bracket view of structure: |
290 300 310 320 330 340
# 9|123456789|123456789|123456789|123456789|123456789|123
$ 289 GCUGUGUAUCAUCCUGCCCGUCGGAGGAGCCACAGUUAAAUUCAAAAGACAAGGC=343
% 289 ((((((::((:(((:[[[:[[[))):))::)))))):::::::::::]]]::]]]