| PKB-number: |
PKB345
|
| Definition: |
SAM-II riboswitch aptamer domain
|
| Organism: |
Sargasso Sea metagenome
|
| Abbreviation: |
SAM-II_riboswitch
|
| RNA type: |
Aptamers
|
| Keywords: |
SAM, riboswitch, S-adenosylmethionine
|
| EMBL number: |
2QWY
|
| Submitted by: |
A.P. Gultyaev
(goultiaevap2@chem.leidenuniv.nl)
|
| Supported by: |
Crystal structure,Sequence comparison,Structure probing
|
| References: |
[1] Gilbert SD et al. (2008). Nature Str. Mol. Biol. 15:177-182.
|
| Comment: |
A representative structure of the SAM-II class of riboswitches. For simplicity, some of tertiary base interactions [1] are not shown here.
|
Stem sizes:
Loop sizes: |
6 10
7 0 9
|
| Position Paired: |
2 -7 ; 25-30
15-21; 45-51
22-23; 42-43
24-24; 40-40
|
