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About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
PMMV-S_UPD-PK2 |
PKB-number: | PKB96 |
Definition: | Pseudoknot PK2 of the upstream pseudoknot domain (UPD) of the 3'-UTR of pepper mild mottle virus, Spanish isolate |
Organism: | pepper mild mottle virus |
Abbreviation: | PMMV-S_UPD-PK2 |
RNA type: | Viral 3 UTR |
Keywords: | tobamovirus; translational regulation |
EMBL number: | M81413 |
Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
Supported by: | Sequence comparison |
References: |
[1] Avila-Rincon M.J. et al. (1989). J. Gen. Virol. 70:3025-3031.
[2] Leathers V. et al. (1993). Mol. Cell. Biol. 13:5331-5347. |
Stem sizes: Loop sizes: |
3 6 1 0 3 |
Position Paired: | 6198-6200; 6208-6210 6202-6207; 6214-6219 |
Bracket view of structure: |
6200 6210 6220 # 789|123456789|123456789| $ 6197 CCGUGGCGAGUACGAUAACUCGUA=6220 % 6197 :(((:[[[[[[))):::]]]]]]: