Intro | |||||
About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
PSLVbeta |
PKB-number: | PKB164 |
Definition: | tRNA-like structure 3'end pseudoknot of RNA beta |
Organism: | poa semilatent virus |
Abbreviation: | PSLVbeta |
RNA type: | Viral tRNA-like |
Keywords: | hordeivirus; RNA 3'end |
EMBL number: | M81486 |
Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
Supported by: | Sequence comparison |
References: | [1] Solovyev A.G. et al. (1996). Virology 219:9-18. |
Stem sizes: Loop sizes: |
14 5 2 1 26 |
Position Paired: | 3497-3504; 3549-3556 3507-3512; 3521-3526 3515-3519; 3583-3587 3531-3536; 3543-3548 3558-3563; 3569-3574 |
Bracket view of structure: |
3500 3510 3520 3530 3540 3550 # 6789|123456789|123456789|123456789|123456789|123456789|12345 $ 3496 AUUGGUAUGUAAGCUACUUCUUCCAGUAGCUGCGUCAUAACAUCAAGGUUAUGCAUACUG=3555 % 3496 :((((((((::((((((::[[[[[:))))))::::((((((::::::))))))))))))) 3560 3570 3580 3590 # 6789|123456789|123456789|123456789|1 $ 3556 AGCCGAAGCUCAGCUUCGGUCCUCCAAGGAAGACCA=3591 % 3556 ):((((((:::::))))))::::::::]]]]]::::