| PKB-number: |
PKB233
|
| Definition: |
ORF1a/ORF1b (polymerase) ribosomal frameshift site
|
| Organism: |
Porcine reproductive and respiratory syndrome virus, European Lelystad strain (LV)
|
| Abbreviation: |
PRRSV-LV
|
| RNA type: |
Viral Frameshift
|
| Keywords: |
arterivirus;
ribosomal frameshifting;
polymerase
|
| EMBL number: |
M96262
|
| Submitted by: |
A.P. Gultyaev
(
gultyaev@rulsfb.LeidenUniv.nl)
|
| Supported by: |
Sequence comparison
|
| References: |
[1] Meulenberg J.J.M. et al. (1993). Virology 192:62-72.
|
Stem sizes:
Loop sizes: |
12 7
4 0 15 |
| Position Paired: |
7402-7407; 7432-7437
7409-7414; 7426-7431
7419-7425; 7453-7459 |
| Bracket view of structure:
|
7390 7400 7410 7420 7430 7440 7450 7460
# |123456789|123456789|123456789|123456789|123456789|123456789|123456789|
$ 7390 UUUAAACUGUUAGCCGCCAGCGGCUUGACCCGCUGUGGCCGCGGCGGCCUAGUUGUGACUGAAACGGCGGU=7460
% 7390 ::::::::::::((((((:((((((::::[[[[[[[)))))))))))):::::::::::::::]]]]]]]:
Contact:
© final design and maintenance: F.H.D.(Eke) van Batenburg; 2001-5-22 PKB00233.html
